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Diplom-Mathematiker
Harald Birkholz
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Kontakt |
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Interessen |
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35A15, 68Uxx, 68Wxx
35A15, 68P10, 68Txx, 68Uxx, 68Wxx, 78A48, 78Mxx, 90Cxx, 91E10, 91A80, 92B20 |
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Software |
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Features: -
TIF-image import -
Preprocessing with white top-hat and total variation of second order -
Single-scale ridge-tracking stable against contrast fluctuation - BMP-image export -
Quantification of length and number of automatically colored fibers -
Quantification of the conditional probability of length, given
orientation -
CSV-table export with parameters and raw data Support: -
Download password distribution
from harald.birkholz@uni-rostock.de
and konrad.engel@uni-rostock.de -
No warranty neither that FilaQuant
meets your requirements nor that it does not damage your data, hard- or software -
Further Questions to harald.birkholz@uni-rostock.de
and konrad.engel@uni-rostock.de Literature: -
BIRKHOLZ,
H., MATSCHEGEWSKI, C., NEBE, J.B. and ENGEL, K., 2009. Quantification of actin filament organization by estimating graph
structures in confocal microscopic images. ISBN 978-3-642-03881-5, IFMBE
Proceedings, 25/4, pp 1932-1935. -
BIRKHOLZ, H., LABAHN, R., ENGEL, K. and NEBE,
J. B., 2010. Automatische Auswertung von Aktinfilament-Strukturen in
konfokal-mikroskopischen Bildern. Biomedical Engineering. Volume 55, Issue s1, (ISSN (Online)
1862-278X, ISSN (Print) 0013-5585, DOI: 10.1515/BMT.2010.553). -
BIRKHOLZ, H., 2011. Extracting the Ridge Set as a Graph for
Quantification of Actin Filament Images obtained by Confocal Laser Scanning
Microscopy. Tenth International Conference on Quality Control by Artificial
Vision, edited by Jean-Charles Pinoli, Johan Debayle, Yann Gavet, Frédéric
Gruy, Claude Lambert, Proc. of SPIE Vol. 8000, 800006. 8 pages. doi:
10.1117/12.895269. -
BIRKHOLZ, H., 2011. A unifying approach to isotropic and anisotropic
total variation denoising models. J. Comput. Appl. Math. 235 (8). pp.
2502 - 2514. |
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Sonstiges |
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